Training materials
Authors: Bérénice Batut or CRUK CI Bioinformatics Core or David Wishart or Laura Cooper or Mathieu Bourgey or SIB Swiss Institute of Bioinformatics
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bioinformatics-core-shared-training/SingleCell_RNASeq_May23
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Interactive Visualization with Python
•• intermediatedata visualisation training torsten schwede & thierry sengstag group -
sib-swiss/SPARQL_course
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hands-on tutorial
Calculating α and β diversity from microbiome taxonomic data
• beginnerMetagenomics Microbial ecology Microbiome diversity metagenomics -
hands-on tutorial
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
hands-on tutorial
Identification of the micro-organisms in a beer using Nanopore sequencing
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
hands-on tutorial
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis Pathogens detection Phylogenetic tree cyoa microgalaxy -
hands-on tutorial
Taxonomic Profiling and Visualization of Metagenomic Data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
hands-on tutorial
Persistent Identifiers
• beginnerFAIR Data, Workflows, and Research data stewardship dmp fair -
hands-on tutorial
Access
• beginnerFAIR Data, Workflows, and Research data stewardship dmp fair