Training materials
Authors: Avans Hogeschool or Nathan Dunn or Olha Nahorna
and Contributors: Armando Arredondo or Erasmus+ Programme or Mikko Rautiainen or Saskia Hiltemann
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hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Introduction to 'Introduction to Galaxy Analyses'