Training materials
Difficulty level: Intermediate
and Authors: Avans Hogeschool or Bräunlich Gerhard or Gary Bader or John Davis or Martin Morgan or The Gulbenkian Training Programme in Bioinforma... or erxleben
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Best Practices in Programming
•• intermediateprogramming reproducibility bernd rinn group -
hands-on tutorial
Galaxy Installation on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
hands-on tutorial
Managing Galaxy on Kubernetes
•• intermediateGalaxy Server administration kubernetes -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
Documentation, Exercise, Handout, Scripts
IBIP19 - Integrative Biological Interpretation using Proteomics (2019)
•• intermediateProteomics -
Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
•• intermediateRNA-Seq Genomics RNA