Training materials
Authors: Avans Hogeschool or Björn Grüning
and Contributors: Andrea Argentini or Emily Angiolini or Erasmus+ Programme or Erik Hjerde or Helena Rasche or Maria Lehtivaara or Munazah Andrabi or Pavel Dvorak or Prof. Tom Freeman or Wolfgang Maier
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Tools, Data, and Workflows for tutorials
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Connecting Galaxy to a compute cluster
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Mapping Jobs to Destinations using TPV
• beginnerGalaxy Server administration git-gat jobs -
hands-on tutorial
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science