Training materials
Authors: Anup Kumar or Janick Mathys or Jeff Xia or Maria Doyle or Personalized Health Informatics Group or Praveen Kumar or The Gulbenkian Training Programme in Bioinformatics
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Video, Training materials, E-learning, Mock data
Advanced SPARQL queries and best practices
••• advancedComputer science Data management FAIR data Medical informatics Clinical data SPARQL Query data RDF Knowledge graph Inference Triplestore Ontology -
Video
Querying versioned terminologies - How to improve the accuracy of data analysis?
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Query data Versioning of Terminology Clinical ATC CHOP ICD-10-GM -
hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
GTPB/ABSTAT18
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GTPB/IBIP19
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GTPB/PDA19
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GTPB/PSLS20
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GTPB/ELB19F