Training materials
Authors: Anup Kumar or Avans Hogeschool or Jan Slifka or Marius van den Beek or Melanie Föll or Simon Gladman or bebatut or erasche
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
slides
Introduction to proteomics, protein identification, quantification and statistical modelling
• beginnerProteomics -
slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Galaxy Monitoring
• beginnerGalaxy Server administration -
slides
Galaxy on the Cloud
• beginnerGalaxy Server administration -
slides
uWSGI
• beginnerGalaxy Server administration -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Reference Data with Data Managers
• beginnerGalaxy Server administration