Training materials
Authors: Anton Nekrutenko or Jan Slifka or Jessica Kirkpatrick krkptrc2@illinois.edu or Maria Lehtivaara or Nate Coraor or allegra.via Via
and Contributors: Eija Korpelainen or Marius van den Beek or Nicola Soranzo
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hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
External Authentication
• beginnerGalaxy Server administration authentication -
hands-on tutorial
NGS data logistics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
slides
Connecting Galaxy to a compute cluster
• beginnerGalaxy Server administration features -
hands-on tutorial
Galaxy Installation with Ansible
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
slides
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration jobs -
course materials, Training materials, Slides, Video
RNA-seq data analysis using Chipster
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course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq
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