Training materials
Difficulty level: Intermediate
and Authors: Anton Nekrutenko or Egon Willighagen or Jessica Kirkpatrick krkptrc2@illinois.edu or Melanie Föll or Radhika Khetani @radhika or UC Davis Bioinformatics Core Training Page
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
hands-on tutorial
Hands-on for 'Library Generation for DIA Analysis' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'DIA Analysis using OpenSwathWorkflow' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'Statistical analysis of DIA data' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of label-free data' tutorial
•• intermediateproteomics label-free -
hands-on tutorial
Mass spectrometry imaging: Finding differential analytes
•• intermediateMetabolomics -
hands-on tutorial
Hands-on for 'Using dataset collections' tutorial
•• intermediategalaxy-interface collections -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
Tutorial
Adding nanomaterial data
•• intermediateToxicology Database management ontologies enanomapper RDF -
Entering and analysing nano safety data
•• intermediateontologies enanomapper