Training materials
Scientific topics: Synthetic genomics
and Authors: Anton Nekrutenko or Dayane Araujo or Eija Korpelainen @eija, ekorpelainen@gmail.com or Maria Lehtivaara or Samaha, Georgina (orcid: 0000-0003-0419-1476) or allegra.via Via or bebatut
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hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
course materials, Training materials, Slides, Video
RNA-seq data analysis using Chipster