Training materials
Keywords: Quarto or prokaryote
and Authors: Anton Nekrutenko or Daniel Blankenberg or David Wishart or Kathi Zarnack or SIB Swiss Institute of Bioinformatics or bioinformatics.ca
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sib-swiss/reproducible-analysis-training
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hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote