Training materials
Authors: Anton Nekrutenko or Bazante Sanders or Boris Steipe or Christine Staiger or Jessica Kirkpatrick krkptrc2@illinois.edu or Monique Zahn or Personalized Health Informatics Group or Simon Andrews
-
hands-on tutorial
Multisample Analysis
••• advancedUsing Galaxy and Managing your Data collections -
hands-on tutorial
Introduction to sequencing with Python (part three)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to sequencing with Python (part two)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to sequencing with Python (part one)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Data manipulation with Pandas
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to sequencing with Python (part four)
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Versioning your code and data with git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
A (very) brief history of genomics
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Very Short Introductions: QC
• beginnerIntroduction to Galaxy Analyses