Training materials
Authors: Anthony Bretaudeau or Sofoklis Keisaris
and Contributors: Anton Nekrutenko or Björn Grüning or CRUK CI Bioinformatics Core or Dr. Nils Gehlenborg or Eija Korpelainen @eija, ekorpelainen@gmail.com or Melanie Föll or Saskia Hiltemann
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Version Control with Git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly