Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Anthony Bretaudeau or Dominik Frantisek Bucik or Jessica Kirkpatrick krkptrc2@illinois.edu or Mehmet Tekman or Pratik Jagtap or Simon Andrews
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slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
slides
Introduction to metatranscriptomics
• beginnerMetagenomics Microbial ecology Microbiome -
hands-on tutorial
Hands-on for 'Comparing inferred cell compositions using MuSiC deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'Genome annotation with Maker' tutorial
••• advancedgenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Functional annotation of protein sequences' tutorial
• beginnergenome-annotation eukaryote