Training materials
Target audience: Students
and Authors: Anthony Bretaudeau or Daniel Blankenberg or Helena Jambor or Jessica Kirkpatrick krkptrc2@illinois.edu or Joachim Wolff or John Chilton or rstudio::conf(2022)
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hands-on tutorial
IGV Introduction
• beginnerIntroduction to Galaxy Analyses -
slides
Introduction to DNA Methylation data analysis
• beginnerEpigenomics Epigenetics -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Maker' tutorial
••• advancedgenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Functional annotation of protein sequences' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome annotation with Maker (short)' tutorial
•• intermediategenome-annotation eukaryote