Training materials
Authors: Anthony Bretaudeau or Bert Overduin @bert or Cristóbal Gallardo or Donny Vrins or Lincoln Stein or Matthias Fahrner or Wolfgang Maier
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hands-on tutorial
Creating an Official Gene Set
• beginnerGenome Annotation apollo2 gmod work-in-progress -
hands-on tutorial
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy nanopore -
hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
hands-on tutorial
Pox virus genome analysis from tiled-amplicon sequencing data
••• advancedGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Principles of learning and how they apply to training and teaching
• beginnerContributing to the Galaxy Training Material