Training materials
Authors: Anthony Bretaudeau or Bazante Sanders or Celia van Gelder or David Wishart or Friederike Ehrhart or Kathi Zarnack or Lars Juhl Jensen
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hands-on tutorial
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
hands-on tutorial
Creating an Official Gene Set
• beginnerGenome Annotation apollo2 gmod work-in-progress -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
hands-on tutorial
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Functional annotation of protein sequences
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Maker
••• advancedGenome Annotation eukaryote gmod jbrowse1 maker