Training materials
Authors: Anthony Bretaudeau or Anup Kumar or Celia van Gelder or Daniel Blankenberg or Janick Mathys or Krzysztof Poterlowicz or Michal Prochazka or Saskia Lawson-Tovey or Terri Attwood
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
hands-on tutorial
Creating an Official Gene Set
• beginnerGenome Annotation apollo2 gmod work-in-progress -
slides
EWAS Epigenome-Wide Association Studies Introduction
• beginnerEpigenomics Epigenetics -
slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
slides
Gearing towards production
• beginnerGalaxy Server administration -
hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
hands-on tutorial
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
hands-on tutorial
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerBioimaging FAIR REMBI