Training materials
Authors: Anne Fouilloux or Cristóbal Gallardo or Eija Korpelainen or Eija Korpelainen @eija, ekorpelainen@gmail.com or Personalized Health Informatics Group or Youri Hoogstrate or erasche
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hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
Introduction to climate data
• beginnerClimate -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
ekorpela/cloud-vm-workshop
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization