Training materials
Contributors: Helena Rasche
and Authors: Anne Fouilloux or Boris Steipe or Daniel Blankenberg or Erasmus+ Programme or Florian Christoph Sigloch or Mira Kuntz or Saskia Hiltemann or erasche
-
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
slides
Galaxy and Celery
• beginnerGalaxy Server administration -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Setting up Celery Workers for Galaxy
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
• beginnerGenetic variation Variant Analysis cyoa -
hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Tools, Data, and Workflows for tutorials
• beginnerContributing to the Galaxy Training Material