Training materials
Authors: Anna Syme or Mateusz Kuzak or Nate Coraor
and Contributors: Andrea Argentini or Brane Leskosek or Computational Biology and Bioinformatics at UCL... or Espen Aberg or John "Scooter" Morris or Martin Krzywinski or Mateusz Kuzak or Patricia Palagi or Pip Griffin or Prof. Tom Freeman or Simon Gladman
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools -
hands-on tutorial
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote -
slides
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration jobs -
slides
Galaxy Monitoring with Telegraf and Grafana
• beginnerGalaxy Server administration -
slides
Galaxy Monitoring with gxadmin
• beginnerGalaxy Server administration
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