Training materials
Authors: Anna Syme or Jessica Kirkpatrick krkptrc2@illinois.edu or Malachi Griffith or Nicola Soranzo or SIB Swiss Institute of Bioinformatics or bebatut
and Contributors: Clemens Blank or Simon Gladman
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hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote -
slides
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration