Training materials
Scientific topics: Next gen sequencing or Transcriptomics
and Authors: Anna Syme or Janick Mathys or Jared Simpson or Julia Jakiela or SIB Swiss Institute of Bioinformatics or Samaha, Georgina (orcid: 0000-0003-0419-1476) or allegra.via Via
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sib-swiss/spatial-transcriptomics-training
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sib-swiss/ena-seqdata-training
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sib-swiss/RNAseq-introduction-training
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sib-swiss/NGS-introduction-training
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sib-swiss/NGS-variants-training
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sib-swiss/single-cell-training
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Inferring single cell trajectories with Monocle3
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
NGS analysis
•• intermediateSequencing NGS Next Generation Sequencing