Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Anna Syme or Christopher Barnett or Egon Willighagen or Lars Juhl Jensen or Simon Bray or allegra.via Via or bebatut
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slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
Creating InChIKeys for IUPAC names
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hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Contributing to BioBlend as a developer
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Regression in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Classification in Machine Learning
• beginnerStatistics and probability Statistics and machine learning