Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Anna Poetsch or Dominik Frantisek Bucik or Egon Willighagen or Marius van den Beek or Melanie Föll or Michelle Brazas or Paul Yorke
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slides
Introduction to proteomics, protein identification, quantification and statistical modelling
• beginnerProteomics -
Creating InChIKeys for IUPAC names
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hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
hands-on tutorial
Library Generation for DIA Analysis
•• intermediateProteomics DIA -
hands-on tutorial
DIA Analysis using OpenSwathWorkflow
•• intermediateProteomics DIA -
hands-on tutorial
Statistical analysis of DIA data
•• intermediateProteomics DIA -
hands-on tutorial
MaxQuant and MSstats for the analysis of label-free data
•• intermediateProteomics label-free