Training materials
Authors: Anika Erxleben or Bioinformatics, Rockefeller University or Gary Bader or Jessica Kirkpatrick krkptrc2@illinois.edu or Melanie Föll or Mijke Jetten or Nicolas Delhomme @delhomme or Pratik Jagtap
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hands-on tutorial
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
slides
Introduction to proteomics, protein identification, quantification and statistical modelling
• beginnerProteomics -
slides
Introduction to metatranscriptomics
• beginnerMetagenomics Microbial ecology Microbiome -
Presentation
Workshop FAIR & Data stewardship for the ITN NUTRIOME project (2024)
• beginnerNutritional science Data management FAIR data Data handling Analysis data stewardship data life cycle Training FAIR Nutrition -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
RockefellerUniversity/RU_tidyverse_core
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RockefellerUniversity/RU_reproducibleR