Training materials
Authors: Anika Erxleben or Anna Syme or Anthony Bretaudeau or David Wishart or Kaivan Kamali or Kathi Zarnack or Laura Leroi or stortebecker
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hands-on tutorial
Creating an Official Gene Set
• beginnerGenome Annotation apollo2 gmod work-in-progress -
hands-on tutorial
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote