Training materials
Authors: Andrew Mason or Delphine Lariviere or Jessica Kirkpatrick krkptrc2@illinois.edu or John Chilton or Maria Levchenko or Radhika Khetani @radhika or Subina Mehta or nekrut
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slides
Introduction to metatranscriptomics
• beginnerMetagenomics Microbial ecology Microbiome -
hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Video
RDMbites | FASTQ files in colorspace
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Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format
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Video
RDMbites | Sequencing Data QC: FastQC metrics
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Video
RDMbites | RNAseq expression data
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hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial
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hands-on tutorial
Debugging Galaxy
• beginnerSoftware engineering Development in Galaxy