Training materials
Include archived: true
and Authors: Andrea Argentini or Anika Erxleben or Frederik Coppens or Simon Gladman or Vicky Schneider
and Contributors: Björn Grüning or Erik Hjerde or Manimozhiyan Arumugam or Marek Vrbacky or Ms. Yo Yehudi or Nils Peder Willassen or Pip Griffin or Simon Gladman
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools -
hands-on tutorial
Reference Data with CVMFS without Ansible
• beginnerGalaxy Server administration