Training materials
Authors: András Aszódi or Bioinformatics, Rockefeller University or Egon Willighagen or Malachi Griffith or Martin Čech or Mehmet Tekman or Praveen Kumar
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hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
slides
Gearing towards production
• beginnerGalaxy Server administration -
slides
Advanced customisation of a Galaxy instance
• beginnerGalaxy Server administration -
slides
Galaxy Troubleshooting
• beginnerGalaxy Server administration -
slides
Galactic Database
• beginnerGalaxy Server administration -
Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
RockefellerUniversity/RU_tidyverse_core
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RockefellerUniversity/RU_reproducibleR