Training materials
Authors: Allegra Via or Anthony Bretaudeau or Avans Hogeschool or Cristóbal Gallardo or Janick Mathys or Mehmet Tekman or Saskia Lawson-Tovey or stortebecker
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hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Creating an Official Gene Set
• beginnerGenome Annotation apollo2 gmod work-in-progress -
hands-on tutorial
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy nanopore -
hands-on tutorial
Train-the-Trainer: putting it all together
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
hands-on tutorial
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics