Training materials
Authors: Alexandre Cormier or Janick Mathys or Jared Simpson or Jüri Reimand or Personalized Health Informatics Group or Samaha, Georgina (orcid: 0000-0003-0419-1476) or Yvan Le Bras
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WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
WORKSHOP: Unlocking nf-core - customising workflows for your research
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WEBINAR: Pro tips for scaling bioinformatics workflows to HPC
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
WORKSHOP: Make your bioinformatics workflows findable and citable
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hands-on tutorial
Hands-on for 'Champs blocs indicators' tutorial
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
e-learning
Basic statistics in Prism
• beginnerStatistics and probability statistics