Training materials
Authors: Alexandre Cormier or Helen Brown or Kathi Zarnack or Malachi Griffith or Simon Gladman or allegra.via Via or erxleben
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slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Galaxy Monitoring
• beginnerGalaxy Server administration -
slides
Galaxy on the Cloud
• beginnerGalaxy Server administration -
slides
uWSGI
• beginnerGalaxy Server administration -
slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Reference Data with Data Managers
• beginnerGalaxy Server administration -
hands-on tutorial
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote