Training materials
Difficulty level: Beginner
and Authors: Alexandre Cormier or Geert van Geest or Jan Slifka or Martin Morgan or Simon Andrews or Vassilios Ioannidis
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Introduction to FAIR Research Data Management & Data Management Plan
• beginnertraining reproducibility data management data security open data mark ibberson group -
Submitting, Finding and Downloading Raw Sequencing Data with ENA
• beginnerFAIR data Metadata Data submission -
Version Control with Git
• beginnerprogramming reproducibility data management -
NGS - Quality Control, Alignment, Visualisation
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health -
NGS - Genome Variant Analysis
• beginnermedicine and health,next generation sequencing,training,agriculture,environmental science,medicine and health medicine and health,next generation sequencing,training,agriculture,environmental science,rémy bruggmann group,medicine and health -
Long-read Sequence Analysis
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health rémy bruggmann group -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis
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