Training materials
Target audience: Students
and Authors: Alexandre Cormier or Bérénice Batut or David Wishart or Wolfgang Maier or bebatut or nekrut
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slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
slides
Introduction to ChIP-Seq data analysis
• beginnerEpigenomics Epigenetics -
slides
Introduction to Microbiome Analysis
• beginnerMetagenomics Microbial ecology Microbiome -
slides
Introduction to Variant analysis
• beginnerGenetic variation Variant Analysis -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Pox virus genome analysis from tiled-amplicon sequencing data' tutorial
••• advancedvariant-analysis virology one-health -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa