Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki | https://orcid.org/0000-0001-... or Bilal Shaikh or Cristóbal Gallardo or Jan Slifka or Marta Lloret Llinares or Pablo Moreno
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Managing Galaxy on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'Galaxy Installation on Kubernetes' tutorial
•• intermediateadmin kubernetes -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Video
Status Update Code of Conduct: Teaming up & Talking about it
•• intermediateGDPR Healthcare research data harmonization -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE