Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki | https://orcid.org/0000-0001-... or Anton Nekrutenko or Jeremy Cohen or Jessica Kirkpatrick krkptrc2@illinois.edu or Radhika Khetani @radhika or UC Davis Bioinformatics Core Training Page
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hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
podcast, slides
Byte-sized RSE Session 4: Continuous Integration
•• intermediateRSE Research software continuous integration coding skills -
Byte-sized RSE Session 3: Testing your Python code
•• intermediateRSE Research software Python coding skills testing -
podcast, slides
RSE Byte-sized RSE Session 2: Collaboration and Code Review via GitHub
•• intermediateRSE Research software code review -
Byte-sized RSE series
•• intermediateRSE coding skills Research software -
hands-on tutorial
Hands-on for 'Using dataset collections' tutorial
•• intermediategalaxy-interface collections -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly