Training materials
Authors: Alexander Botzki or Daniel Blankenberg or Jessica Kirkpatrick krkptrc2@illinois.edu or Lincoln Stein or Nicola Soranzo or blankclemens
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slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Gearing towards production
• beginnerGalaxy Server administration -
slides
Galactic Database
• beginnerGalaxy Server administration -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerdev jupyter-notebook