Training materials
Resource type: hands-on tutorial
and Authors: Alexander Botzki or Anthony Bretaudeau or Anton Nekrutenko or Donny Vrins or Erwan Corre or Gary Bader or Hans-Rudolf Hotz
-
hands-on tutorial
Versioning your code and data with git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
A (very) brief history of genomics
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Very Short Introductions: QC
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
IGV Introduction
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'Comparative gene analysis in unannotated genomes' tutorial
-
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial