Training materials
Difficulty level: Intermediate
and Authors: Alex Ostrovsky or Bishwa Ghimire or Eija Korpelainen @eija, ekorpelainen@gmail.com or Gildas Le Corguillé or Janick Mathys or Maria Doyle or bgruening
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing -
course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
hands-on tutorial
NGS analysis
•• intermediateSequencing NGS Next Generation Sequencing