Training materials
Difficulty level: Intermediate
and Authors: Alex Ostrovsky or András Aszódi or Egon Willighagen or Jessica Kirkpatrick krkptrc2@illinois.edu or Lars Juhl Jensen or Manuel Corpas
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
Tutorial
Adding nanomaterial data
•• intermediateToxicology Database management ontologies enanomapper RDF -
Entering and analysing nano safety data
•• intermediateontologies enanomapper -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation