Training materials
Difficulty level: Intermediate
and Authors: Aleksandra Nenadic or Anton Nekrutenko or Avans Hogeschool or Jessica Kirkpatrick krkptrc2@illinois.edu or Radhika Khetani @radhika or UC Davis Bioinformatics Core Training Page
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Intermediate Research Software Development Skills In Python
•• intermediateintermediate Coding software engineering Carpentries Incubator -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediatedata-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediatedata-science SQL Python jupyter-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediatedata-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'SQL Educational Game - Murder Mystery' tutorial
•• intermediatedata-science game SQL jupyter-notebook -
hands-on tutorial
Hands-on for 'Using dataset collections' tutorial
•• intermediategalaxy-interface collections -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly