Training materials
Authors: Aidan Budd or Manuel Corpas or Robin Haw or Vasundra Touré or stortebecker
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Pathways and Network Analysis of -Omics data 2018 Module 4-More Depth on Network and Pathway Analysis
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Bioinformatics for Cancer Genomics 2018 Module 14-Variants to Networks
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Pathways and Network Analysis with -Omics Data 2017 Module 4-More Depth on Network and Pathway Analysis
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Bioinformatics for Cancer Genomics 2017 Module 8-Variants to Networks
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High-Throughput Biology 2017 Module 15-More Depth on Network and Pathway Analysis
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools