Training materials
Authors: Aidan Budd or Donny Vrins or Gary Van Domselaar or Wendi Bacon or bebatut or carpentries-incubator
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
carpentries-incubator/R-ecology-lesson-intermediate
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carpentries-incubator/gitlab-novice
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carpentries-incubator/fair-for-leaders
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carpentries-incubator/python_packaging
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carpentries-incubator/scrna-seq-analysis
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carpentries-incubator/lc-litsearchr
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carpentries-incubator/R-ecology-lesson