Training materials
Authors: Aidan Budd or Delphine Lariviere or Maria Doyle or Marius van den Beek or St├®phane Plaisance
and Contributors: Anton Nekrutenko or Delphine Lariviere
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial
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hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Making sense of a newly assembled genome' tutorial
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hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
Hands-on for 'Use Jupyter notebooks in Galaxy' tutorial
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hands-on tutorial
Hands-on for 'NGS data logistics' tutorial
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slides
Slides for 'Essential genes detection with Transposon insertion sequencing' tutorial
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slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly
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