Training materials
Authors: Aidan Budd or Daniel Blankenberg or Dave Clements or Julie Sullivan or Kaivan Kamali or Simon Bray or The Carpentries or Wolfgang Maier
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slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Gearing towards production
• beginnerGalaxy Server administration -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Hands-on for 'Pox virus genome analysis from tiled-amplicon sequencing data' tutorial
••• advancedvariant-analysis virology one-health -
hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediatevariant-analysis virology -
hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediatedata-science conda jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Testing' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis