Training materials
Authors: Aidan Budd or Cristóbal Gallardo or Nate Coraor or Paul Yorke or Personalized Health Informatics Group or Samaha, Georgina (orcid: 0000-0003-0419-1476) or tnabtaf
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WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
WORKSHOP: Unlocking nf-core - customising workflows for your research
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WEBINAR: Pro tips for scaling bioinformatics workflows to HPC
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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WORKSHOP: Make your bioinformatics workflows findable and citable
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slides
Slides for 'Galaxy from an administrator's point of view' tutorial
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WORKSHOP: RNA-Seq: reads to differential genes and pathways
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization