Training materials
Difficulty level: Beginner
and Authors: Aidan Budd or Bioinformatics, Rockefeller University or Maria Lehtivaara or Personalized Health Informatics Group or Stéphanie Robin or Youri Hoogstrate or Yvan Le Bras
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slides
Introduction to DNA Methylation data analysis
• beginnerEpigenomics Epigenetics -
slides
Introduction to Variant analysis
• beginnerGenetic variation Variant Analysis -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Champs blocs indicators
• beginnerEcology -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Generic plugins
• beginnerSoftware engineering Development in Galaxy