Training materials
Difficulty level: Beginner
and Authors: Aidan Budd or Avans Hogeschool or Eija Korpelainen or Julie Sullivan or Laura Leroi or Sergio Martínez Cuesta
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'CLI basics' tutorial
• beginnerdata-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced SQL' tutorial
• beginnerdata-science SQL jupyter-notebook -
hands-on tutorial
Hands-on for 'Introduction to SQL' tutorial
• beginnerdata-science SQL jupyter-notebook -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Training materials
Introduction to GitHub
• beginnerGitHub Reproducibility -
Training materials
Beginners introduction to Git and GitHub
• beginnerGit GitHub control version Reproducibility -
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq