Training materials
Authors: Aidan Budd or AstraZeneca or Jared Simpson or Wendi Bacon or erxleben or natefoo
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
semacu/20180223_ORCID_Chemistry_Cambridge
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semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge
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semacu/20180726_TrainMalta_Unix_R
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semacu/20190927_IntroductionGithub_HDRUK
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semacu/20171024_GitHub_Chemistry_Cambridge
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semacu/20181003_Intro_git_GitHub
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hands-on tutorial
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics