Training materials
Authors: Aidan Budd or Anika Erxleben or Bruno Gaeta or Florian Christoph Sigloch or Helen Brown or Martin Čech or Sergio Martínez Cuesta or Wendi Bacon or allegra.via Via
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
slides
Gearing towards production
• beginnerGalaxy Server administration -
slides
Advanced customisation of a Galaxy instance
• beginnerGalaxy Server administration -
slides
Galaxy Troubleshooting
• beginnerGalaxy Server administration -
slides
Galactic Database
• beginnerGalaxy Server administration -
semacu/20180223_ORCID_Chemistry_Cambridge